Paraglaciecola sp. T6c

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Paraglaciecola

Description

Paraglaciecola sp. T6c is a Gram-negative bacterium characterized by its single replicon. This organism has been cataloged under the accession number NC_008228.1, which provides a reference for its genomic information. As a member of the genus Paraglaciecola, this bacterium is likely associated with cold environments, reflecting the ecological adaptations of its relatives. The presence of a single replicon may suggest a streamlined genomic organization, which can be advantageous for survival in extreme conditions. The ecological role of Paraglaciecola sp. T6c may involve participating in nutrient cycling within its environment, potentially influencing microbial community dynamics in cold ecosystems. Understanding its traits and genomic structure can provide insights into its adaptability and function in these unique habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusParaglaciecola
SpeciesParaglaciecola sp. T6c
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraglaciecola sp. T6c, complete sequence.

Gene Summary

Adenine Count

1435270 bp

Thymine Count

1437496 bp

Guanine Count

1155532 bp

Cytosine Count

1158707 bp

Genome Length

5187005 bp

Protein-coding Genes

4347 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aldose epimerase family proteinPATL_RS13735Not AvailableNegative3266618 - 326783845248.5
sodium/sugar symporterPATL_RS13740Not AvailableNegative3268064 - 326963256944.4
duf1080 domain-containing proteinPATL_RS13745Not AvailableNegative3269938 - 327070228214.3
gluconate 2-dehydrogenase subunit 3 family proteinPATL_RS13750Not AvailableNegative3270772 - 327137121754.2
gmc oxidoreductasePATL_RS13755Not AvailableNegative3271374 - 327305963433.9
hydroxypyruvate isomerase family proteinPATL_RS13760Not AvailableNegative3273127 - 327403233231.6
nucleoside permeasePATL_RS13765Not AvailableNegative3274025 - 327524544362.8
sugar phosphate isomerase/epimerase family proteinPATL_RS13770Not AvailableNegative3275368 - 327642038936.8
gfo/idh/moca family proteinPATL_RS13775Not AvailableNegative3276575 - 327775341868.7
laci family dna-binding transcriptional regulatorPATL_RS13780Not AvailablePositive3278058 - 327906536040.7

Displaying genes 2771 – 2780 of 4454 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.