Paraglaciecola sp. T6c

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Paraglaciecola

Description

Paraglaciecola sp. T6c is a Gram-negative bacterium characterized by its single replicon. This organism has been cataloged under the accession number NC_008228.1, which provides a reference for its genomic information. As a member of the genus Paraglaciecola, this bacterium is likely associated with cold environments, reflecting the ecological adaptations of its relatives. The presence of a single replicon may suggest a streamlined genomic organization, which can be advantageous for survival in extreme conditions. The ecological role of Paraglaciecola sp. T6c may involve participating in nutrient cycling within its environment, potentially influencing microbial community dynamics in cold ecosystems. Understanding its traits and genomic structure can provide insights into its adaptability and function in these unique habitats.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Alteromonadales
Family	Alteromonadaceae
Genus	Paraglaciecola
Species	Paraglaciecola sp. T6c
Strain	No strain

Profile

Physiology
Gram staining properties	Gram-negative
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Paraglaciecola sp. T6c, complete sequence.

NC_008228.1

Gene Summary

Adenine Count

1435270 bp

Thymine Count

1437496 bp

Guanine Count

1155532 bp

Cytosine Count

1158707 bp

Genome Length

5187005 bp

Protein-coding Genes

4347 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
lysr family transcriptional regulator	PATL_RS11885	Not Available	Negative	2837508 - 2838425	34577.3
class ii aldolase/adducin family protein	PATL_RS11890	Not Available	Positive	2838513 - 2839319	29177.9
m14 family metallocarboxypeptidase	PATL_RS11895	Not Available	Negative	2839388 - 2840308	33991.9
ribbon-helix-helix domain-containing protein	PATL_RS11900	Not Available	Negative	2840532 - 2840918	15003.0
hd domain-containing protein	PATL_RS11905	Not Available	Negative	2841058 - 2841696	24425.1
excalibur calcium-binding domain-containing protein	PATL_RS11910	Not Available	Negative	2841871 - 2842206	12369.7
substrate-binding periplasmic protein	PATL_RS11915	Not Available	Negative	2842332 - 2843108	29421.3
tim-barrel domain-containing protein	PATL_RS11920	Not Available	Negative	2843349 - 2845775	91379.2
alpha/beta hydrolase	PATL_RS11925	Not Available	Negative	2845918 - 2846784	32800.9
alpha-amylase family glycosyl hydrolase	PATL_RS11930	Not Available	Negative	2846832 - 2848628	67166.4

Displaying genes 2401 – 2410 of 4454 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.