Paraglaciecola sp. T6c

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Paraglaciecola

Description

Paraglaciecola sp. T6c is a Gram-negative bacterium characterized by its single replicon. This organism has been cataloged under the accession number NC_008228.1, which provides a reference for its genomic information. As a member of the genus Paraglaciecola, this bacterium is likely associated with cold environments, reflecting the ecological adaptations of its relatives. The presence of a single replicon may suggest a streamlined genomic organization, which can be advantageous for survival in extreme conditions. The ecological role of Paraglaciecola sp. T6c may involve participating in nutrient cycling within its environment, potentially influencing microbial community dynamics in cold ecosystems. Understanding its traits and genomic structure can provide insights into its adaptability and function in these unique habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusParaglaciecola
SpeciesParaglaciecola sp. T6c
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraglaciecola sp. T6c, complete sequence.

Gene Summary

Adenine Count

1435270 bp

Thymine Count

1437496 bp

Guanine Count

1155532 bp

Cytosine Count

1158707 bp

Genome Length

5187005 bp

Protein-coding Genes

4347 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uracil-xanthine permease family proteinPATL_RS11340Not AvailablePositive2687391 - 268885151435.9
8-oxoguanine deaminasePATL_RS11345Not AvailablePositive2689001 - 269038050268.5
tonb-dependent siderophore receptorPATL_RS11350Not AvailablePositive2690697 - 269313588842.3
cupin domain-containing proteinPATL_RS11355Not AvailablePositive2693219 - 269494663416.4
hypothetical proteinPATL_RS11360Not AvailablePositive2695242 - 269554711160.5
porin family proteinPATL_RS11365Not AvailableNegative2695641 - 269622221042.8
efflux rnd transporter periplasmic adaptor subunitPATL_RS11370Not AvailablePositive2696765 - 269798244031.4
efflux rnd transporter permease subunitPATL_RS11375Not AvailablePositive2697998 - 2701468125105.0
efflux rnd transporter permease subunitPATL_RS11380Not AvailablePositive2701461 - 2704583113959.0
aldo/keto reductasePATL_RS11385Not AvailablePositive2704675 - 270569137529.5

Displaying genes 2291 – 2300 of 4454 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.