Paraglaciecola sp. T6c

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Paraglaciecola

Description

Paraglaciecola sp. T6c is a Gram-negative bacterium characterized by its single replicon. This organism has been cataloged under the accession number NC_008228.1, which provides a reference for its genomic information. As a member of the genus Paraglaciecola, this bacterium is likely associated with cold environments, reflecting the ecological adaptations of its relatives. The presence of a single replicon may suggest a streamlined genomic organization, which can be advantageous for survival in extreme conditions. The ecological role of Paraglaciecola sp. T6c may involve participating in nutrient cycling within its environment, potentially influencing microbial community dynamics in cold ecosystems. Understanding its traits and genomic structure can provide insights into its adaptability and function in these unique habitats.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Alteromonadales
Family	Alteromonadaceae
Genus	Paraglaciecola
Species	Paraglaciecola sp. T6c
Strain	No strain

Profile

Physiology
Gram staining properties	Gram-negative
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Paraglaciecola sp. T6c, complete sequence.

NC_008228.1

Gene Summary

Adenine Count

1435270 bp

Thymine Count

1437496 bp

Guanine Count

1155532 bp

Cytosine Count

1158707 bp

Genome Length

5187005 bp

Protein-coding Genes

4347 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
atp-binding protein	PATL_RS10745	Not Available	Positive	2548103 - 2551231	115860.0
arsr/smtb family transcription factor	PATL_RS10750	Not Available	Negative	2551326 - 2551628	11154.5
yeee/yede family protein	PATL_RS10755	Not Available	Negative	2551634 - 2552107	16626.7
yeee/yede family protein	PATL_RS10760	Not Available	Negative	2552107 - 2552586	16392.2
tigr03643 family protein	PATL_RS10765	Not Available	Positive	2553550 - 2553825	10831.2
tlpa family protein disulfide reductase	PATL_RS10770	Not Available	Negative	2553834 - 2554649	29779.4
decarboxylating nadp(+)-dependent phosphogluconate dehydrogenase	PATL_RS10775	Not Available	Negative	2555257 - 2556726	53410.9
tyrosine-type recombinase/integrase	PATL_RS10780	Not Available	Positive	2557218 - 2558453	47067.5
membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family	PATL_RS10785	Not Available	Negative	2558550 - 2560994	89326.1
alpha-amylase family glycosyl hydrolase	PATL_RS10790	Not Available	Negative	2561287 - 2563059	67562.8

Displaying genes 2171 – 2180 of 4454 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.