Paraglaciecola sp. T6c

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Paraglaciecola

Description

Paraglaciecola sp. T6c is a Gram-negative bacterium characterized by its single replicon. This organism has been cataloged under the accession number NC_008228.1, which provides a reference for its genomic information. As a member of the genus Paraglaciecola, this bacterium is likely associated with cold environments, reflecting the ecological adaptations of its relatives. The presence of a single replicon may suggest a streamlined genomic organization, which can be advantageous for survival in extreme conditions. The ecological role of Paraglaciecola sp. T6c may involve participating in nutrient cycling within its environment, potentially influencing microbial community dynamics in cold ecosystems. Understanding its traits and genomic structure can provide insights into its adaptability and function in these unique habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusParaglaciecola
SpeciesParaglaciecola sp. T6c
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraglaciecola sp. T6c, complete sequence.

Gene Summary

Adenine Count

1435270 bp

Thymine Count

1437496 bp

Guanine Count

1155532 bp

Cytosine Count

1158707 bp

Genome Length

5187005 bp

Protein-coding Genes

4347 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exem/nuch family extracellular endonucleasePATL_RS05280Not AvailablePositive1226869 - 1231380158024.0
cohesin domain-containing proteinPATL_RS05285Not AvailablePositive1231418 - 123196918967.5
s8 family serine peptidasePATL_RS05290Not AvailablePositive1232391 - 1236815154319.0
efflux rnd transporter periplasmic adaptor subunitPATL_RS05295Not AvailablePositive1237190 - 123825438814.3
efflux rnd transporter permease subunitPATL_RS05300Not AvailablePositive1238260 - 1241370113642.0
rna polymerase sigma factor rpodPATL_RS05305Not AvailableNegative1241650 - 124349170264.5
dna primasePATL_RS05310Not AvailableNegative1243637 - 124540366890.0
gatb/yqey domain-containing proteinPATL_RS05315Not AvailableNegative1245558 - 124600116451.1
30s ribosomal protein s21PATL_RS05320Not AvailableNegative1246086 - 12463018701.83
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadPATL_RS05325Not AvailablePositive1246520 - 124753336326.9

Displaying genes 1071 – 1080 of 4454 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.