Xanthomonas hortorum pv. gardneri

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas hortorum pv. gardneri is a rod-shaped bacterium that exhibits motility through the presence of flagella. This species is part of the Xanthomonadaceae family and is known for its role as a plant pathogen, specifically affecting various horticultural crops. The genetic material of X. hortorum pv. gardneri is organized with a single replicon, which is typical for this group of bacteria. The accession number for its genome is NZ_CP018731.1, which allows for further genomic studies and comparisons with other strains within the Xanthomonas genus. Understanding the shape and motility of Xanthomonas hortorum pv. gardneri can provide insights into its pathogenicity and interactions with host plants. The rod shape is common among many bacteria and can influence the bacterium's ability to invade plant tissues. Furthermore, the presence of flagella suggests that this bacterium can move toward favorable environments, which may enhance its survival and infection capabilities. Ecologically, Xanthomonas hortorum pv. gardneri exemplifies the complex interactions between microorganisms and plants. Its motility and pathogenic nature can impact agricultural practices and crop yields, highlighting the importance of monitoring and managing such bacterial pathogens in horticulture. Understanding its traits can inform disease management strategies and contribute to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas hortorum
Strainpv. gardneri

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas hortorum pv. gardneri
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas hortorum pv. gardneri strain ICMP 7383 chromosome,

Gene Summary

Adenine Count

969925 bp

Thymine Count

966783 bp

Guanine Count

1686998 bp

Cytosine Count

1689396 bp

Genome Length

5313102 bp

Protein-coding Genes

4399 genes

Non-Coding Genes

243 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rod shape-determining protein mredBI317_RS20180Not AvailableNegative4437339 - 443782418042.9
rod shape-determining protein mrecBI317_RS20185Not AvailableNegative4437821 - 443917046045.8
rod shape-determining proteinBI317_RS20190Not AvailableNegative4439343 - 444038937383.4
carbohydrate kinase family proteinBI317_RS20195Not AvailablePositive4440666 - 444159834513.1
sigma-54-dependent fis family transcriptional regulatorBI317_RS20200Not AvailablePositive4441954 - 444392772148.5
tonb-dependent receptorBI317_RS20210Not AvailableNegative4444552 - 444684382714.0
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseBI317_RS20215Not AvailableNegative4446995 - 444810138654.7
beta-propeller fold lactonase family proteinBI317_RS20220Not AvailableNegative4448137 - 444921037569.9
c-type cytochromeBI317_RS20225Not AvailableNegative4449207 - 444985721600.1
quinoprotein dehydrogenase-associated putative abc transporter substrate-binding proteinBI317_RS20230Not AvailableNegative4449902 - 445167762197.6

Displaying genes 3901 – 3910 of 4642 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.