Xanthomonas hortorum pv. gardneri

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas hortorum pv. gardneri is a rod-shaped bacterium that exhibits motility through the presence of flagella. This species is part of the Xanthomonadaceae family and is known for its role as a plant pathogen, specifically affecting various horticultural crops. The genetic material of X. hortorum pv. gardneri is organized with a single replicon, which is typical for this group of bacteria. The accession number for its genome is NZ_CP018731.1, which allows for further genomic studies and comparisons with other strains within the Xanthomonas genus. Understanding the shape and motility of Xanthomonas hortorum pv. gardneri can provide insights into its pathogenicity and interactions with host plants. The rod shape is common among many bacteria and can influence the bacterium's ability to invade plant tissues. Furthermore, the presence of flagella suggests that this bacterium can move toward favorable environments, which may enhance its survival and infection capabilities. Ecologically, Xanthomonas hortorum pv. gardneri exemplifies the complex interactions between microorganisms and plants. Its motility and pathogenic nature can impact agricultural practices and crop yields, highlighting the importance of monitoring and managing such bacterial pathogens in horticulture. Understanding its traits can inform disease management strategies and contribute to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas hortorum
Strainpv. gardneri

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas hortorum pv. gardneri
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas hortorum pv. gardneri strain ICMP 7383 chromosome,

Gene Summary

Adenine Count

969925 bp

Thymine Count

966783 bp

Guanine Count

1686998 bp

Cytosine Count

1689396 bp

Genome Length

5313102 bp

Protein-coding Genes

4399 genes

Non-Coding Genes

243 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xopau family type iii secretion system effector serine/threonine kinaseBI317_RS17425Not AvailablePositive3784341 - 378600261390.5
exodeoxyribonuclease v subunit alphaBI317_RS26690Not AvailableNegative3786150 - 378644610815.8
exodeoxyribonuclease v subunit alphaBI317_RS17435Not AvailablePositive3786764 - 37869787682.99
rebb family r body proteinBI317_RS17440Not AvailableNegative3787041 - 378737011331.4
exodeoxyribonuclease v subunit alphaBI317_RS17445Not AvailablePositive3787765 - 378891442113.8
type iii secretion system leucine-rich repeat domain-containing effector xoplBI317_RS17450Not AvailablePositive3789273 - 379089560068.3
copper homeostasis protein cutcBI317_RS17455Not AvailableNegative3791316 - 379204725767.1
n(4)-(beta-n-acetylglucosaminyl)-l-asparaginaseBI317_RS17460Not AvailableNegative3792044 - 379310837513.8
vwa domain-containing proteinBI317_RS17465Not AvailablePositive3793696 - 379551064780.5
sigma-70 family rna polymerase sigma factorBI317_RS17470Not AvailablePositive3795540 - 379611221710.9

Displaying genes 3381 – 3390 of 4642 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.