Xanthomonas hortorum pv. gardneri

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas hortorum pv. gardneri is a rod-shaped bacterium that exhibits motility through the presence of flagella. This species is part of the Xanthomonadaceae family and is known for its role as a plant pathogen, specifically affecting various horticultural crops. The genetic material of X. hortorum pv. gardneri is organized with a single replicon, which is typical for this group of bacteria. The accession number for its genome is NZ_CP018731.1, which allows for further genomic studies and comparisons with other strains within the Xanthomonas genus. Understanding the shape and motility of Xanthomonas hortorum pv. gardneri can provide insights into its pathogenicity and interactions with host plants. The rod shape is common among many bacteria and can influence the bacterium's ability to invade plant tissues. Furthermore, the presence of flagella suggests that this bacterium can move toward favorable environments, which may enhance its survival and infection capabilities. Ecologically, Xanthomonas hortorum pv. gardneri exemplifies the complex interactions between microorganisms and plants. Its motility and pathogenic nature can impact agricultural practices and crop yields, highlighting the importance of monitoring and managing such bacterial pathogens in horticulture. Understanding its traits can inform disease management strategies and contribute to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas hortorum
Strainpv. gardneri

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas hortorum pv. gardneri
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas hortorum pv. gardneri strain ICMP 7383 chromosome,

Gene Summary

Adenine Count

969925 bp

Thymine Count

966783 bp

Guanine Count

1686998 bp

Cytosine Count

1689396 bp

Genome Length

5313102 bp

Protein-coding Genes

4399 genes

Non-Coding Genes

243 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rlme family rna methyltransferaseBI317_RS14425Not AvailableNegative3127708 - 312834023584.7
ribosome assembly rna-binding protein yhbyBI317_RS14430Not AvailablePositive3128406 - 312871111185.7
mth938-like domain-containing proteinBI317_RS14435Not AvailablePositive3128727 - 312910713823.8
peptidoglycan dd-metalloendopeptidase family proteinBI317_RS14440Not AvailableNegative3129276 - 313004926530.7
yqaa family proteinBI317_RS14445Not AvailableNegative3130046 - 313066022208.0
protein-l-isoaspartate(d-aspartate) o-methyltransferaseBI317_RS14450Not AvailableNegative3130679 - 313135924293.5
5'/3'-nucleotidase sureBI317_RS14455Not AvailableNegative3131356 - 313213527470.5
smr/muts family proteinBI317_RS14460Not AvailablePositive3132235 - 313277419715.5
trna pseudouridine(13) synthase trudBI317_RS14465Not AvailableNegative3132899 - 313400240267.9
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseBI317_RS14470Not AvailableNegative3134254 - 313474517350.9

Displaying genes 2861 – 2870 of 4642 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.