Xanthomonas hortorum pv. gardneri

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas hortorum pv. gardneri is a rod-shaped bacterium that exhibits motility through the presence of flagella. This species is part of the Xanthomonadaceae family and is known for its role as a plant pathogen, specifically affecting various horticultural crops. The genetic material of X. hortorum pv. gardneri is organized with a single replicon, which is typical for this group of bacteria. The accession number for its genome is NZ_CP018731.1, which allows for further genomic studies and comparisons with other strains within the Xanthomonas genus. Understanding the shape and motility of Xanthomonas hortorum pv. gardneri can provide insights into its pathogenicity and interactions with host plants. The rod shape is common among many bacteria and can influence the bacterium's ability to invade plant tissues. Furthermore, the presence of flagella suggests that this bacterium can move toward favorable environments, which may enhance its survival and infection capabilities. Ecologically, Xanthomonas hortorum pv. gardneri exemplifies the complex interactions between microorganisms and plants. Its motility and pathogenic nature can impact agricultural practices and crop yields, highlighting the importance of monitoring and managing such bacterial pathogens in horticulture. Understanding its traits can inform disease management strategies and contribute to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas hortorum
Strainpv. gardneri

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas hortorum pv. gardneri
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas hortorum pv. gardneri strain ICMP 7383 chromosome,

Gene Summary

Adenine Count

969925 bp

Thymine Count

966783 bp

Guanine Count

1686998 bp

Cytosine Count

1689396 bp

Genome Length

5313102 bp

Protein-coding Genes

4399 genes

Non-Coding Genes

243 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gh35 family beta-galactosidase galdBI317_RS14220Not AvailableNegative3079516 - 308118360940.0
sialate o-acetylesteraseBI317_RS14225Not AvailableNegative3081267 - 308318368625.9
wd40/yvtn/bnr-like repeat-containing proteinBI317_RS14230Not AvailableNegative3083290 - 308555481720.4
tonb-dependent receptorBI317_RS14235Not AvailableNegative3085663 - 308838999969.7
tonb-dependent receptorBI317_RS14240Not AvailableNegative3088727 - 3091657108449.0
lysr family transcriptional regulatorBI317_RS14245Not AvailableNegative3091921 - 309289235362.4
2-dehydro-3-deoxy-6-phosphogalactonate aldolaseBI317_RS14250Not AvailablePositive3093308 - 309394021946.3
galactonate dehydrataseBI317_RS14255Not AvailablePositive3093937 - 309508541936.3
smp-30/gluconolactonase/lre family proteinBI317_RS14260Not AvailablePositive3095079 - 309599633786.4
2-dehydro-3-deoxygalactonokinaseBI317_RS14265Not AvailablePositive3095993 - 309693733343.8

Displaying genes 2821 – 2830 of 4642 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.