Xanthomonas hortorum pv. gardneri

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas hortorum pv. gardneri is a rod-shaped bacterium that exhibits motility through the presence of flagella. This species is part of the Xanthomonadaceae family and is known for its role as a plant pathogen, specifically affecting various horticultural crops. The genetic material of X. hortorum pv. gardneri is organized with a single replicon, which is typical for this group of bacteria. The accession number for its genome is NZ_CP018731.1, which allows for further genomic studies and comparisons with other strains within the Xanthomonas genus. Understanding the shape and motility of Xanthomonas hortorum pv. gardneri can provide insights into its pathogenicity and interactions with host plants. The rod shape is common among many bacteria and can influence the bacterium's ability to invade plant tissues. Furthermore, the presence of flagella suggests that this bacterium can move toward favorable environments, which may enhance its survival and infection capabilities. Ecologically, Xanthomonas hortorum pv. gardneri exemplifies the complex interactions between microorganisms and plants. Its motility and pathogenic nature can impact agricultural practices and crop yields, highlighting the importance of monitoring and managing such bacterial pathogens in horticulture. Understanding its traits can inform disease management strategies and contribute to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas hortorum
Strainpv. gardneri

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas hortorum pv. gardneri
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas hortorum pv. gardneri strain ICMP 7383 chromosome,

Gene Summary

Adenine Count

969925 bp

Thymine Count

966783 bp

Guanine Count

1686998 bp

Cytosine Count

1689396 bp

Genome Length

5313102 bp

Protein-coding Genes

4399 genes

Non-Coding Genes

243 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exodeoxyribonuclease v subunit alphaBI317_RS27555Not AvailablePositive3039601 - 30398267837.53
mfs transporterBI317_RS14060Not AvailablePositive3039992 - 304129046313.2
phosphatase pap2 family proteinBI317_RS14065Not AvailableNegative3041371 - 304206925965.7
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseBI317_RS14070Not AvailableNegative3042050 - 304331545231.4
atp-binding proteinBI317_RS14075Not AvailablePositive3043436 - 304466244015.5
response regulator transcription factorBI317_RS14080Not AvailablePositive3044659 - 304523721116.4
glycoside hydrolase family 5 proteinBI317_RS14090Not AvailableNegative3046016 - 304700235350.9
putative bifunctional diguanylate cyclase/phosphodiesteraseBI317_RS14095Not AvailablePositive3047429 - 304928567690.1
sodium/sugar symporterBI317_RS14100Not AvailableNegative3049387 - 305094956297.7
glycoside hydrolase family 3 proteinBI317_RS14105Not AvailableNegative3051205 - 305381791810.4

Displaying genes 2791 – 2800 of 4642 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.