Pukyongiella litopenaei

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pukyongiella

Description

Pukyongiella litopenaei is a bacterium characterized by having two replicons. The organism is cataloged under the accession numbers NZ_CP043623.1 and NZ_CP027665.1, which provide genetic information essential for its identification and classification. This species contributes to our understanding of microbial diversity and the ecological roles that bacteria play in various environments. The presence of two replicons may suggest a complex regulatory mechanism for gene expression and replication, potentially allowing Pukyongiella litopenaei to adapt to changing environmental conditions. Further studies of Pukyongiella litopenaei may reveal its ecological interactions and potential applications in biotechnology or environmental science, given the diverse roles that bacteria play in ecosystems. Understanding the genomic features associated with this organism can provide insights into its adaptability and functionality within its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPukyongiella
SpeciesPukyongiella litopenaei
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pukyongiella litopenaei strain SH-1 chromosome, complete genome.

Gene Summary

Adenine Count

659597 bp

Thymine Count

659520 bp

Guanine Count

1286479 bp

Cytosine Count

1286542 bp

Genome Length

3892138 bp

Protein-coding Genes

3682 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lrp/asnc family transcriptional regulatorC6Y53_RS00455Not AvailablePositive87227 - 8768216354.6
3-keto-5-aminohexanoate cleavage proteinC6Y53_RS00460Not AvailablePositive87855 - 8869129740.5
metal abc transporter permeaseC6Y53_RS00465Not AvailableNegative88659 - 8948927583.5
atp-binding cassette domain-containing proteinC6Y53_RS00470Not AvailableNegative89489 - 9024126711.3
fur family transcriptional regulatorC6Y53_RS00475Not AvailableNegative90238 - 9073517846.3
zinc abc transporter substrate-binding proteinC6Y53_RS00480Not AvailablePositive90815 - 9174732504.1
atp-dependent clp protease proteolytic subunitC6Y53_RS00485Not AvailablePositive91861 - 9249323308.8
atp-dependent clp protease atp-binding subunit clpxC6Y53_RS00490Not AvailablePositive92644 - 9391245949.1
rida family proteinC6Y53_RS00495Not AvailablePositive93918 - 9430413715.5
1,2-phenylacetyl-coa epoxidase subunit paaaC6Y53_RS00500Not AvailablePositive94719 - 9569336529.3

Displaying genes 221 – 230 of 3836 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.