Pukyongiella litopenaei

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pukyongiella

Description

Pukyongiella litopenaei is a bacterium characterized by having two replicons. The organism is cataloged under the accession numbers NZ_CP043623.1 and NZ_CP027665.1, which provide genetic information essential for its identification and classification. This species contributes to our understanding of microbial diversity and the ecological roles that bacteria play in various environments. The presence of two replicons may suggest a complex regulatory mechanism for gene expression and replication, potentially allowing Pukyongiella litopenaei to adapt to changing environmental conditions. Further studies of Pukyongiella litopenaei may reveal its ecological interactions and potential applications in biotechnology or environmental science, given the diverse roles that bacteria play in ecosystems. Understanding the genomic features associated with this organism can provide insights into its adaptability and functionality within its ecological niche.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Alphaproteobacteria
Order	Rhodobacterales
Family	Paracoccaceae
Genus	Pukyongiella
Species	Pukyongiella litopenaei
Strain	No strain

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pukyongiella litopenaei strain SH-1 chromosome, complete genome.

NZ_CP027665.1 NZ_CP043623.1

Gene Summary

Adenine Count

659597 bp

Thymine Count

659520 bp

Guanine Count

1286479 bp

Cytosine Count

1286542 bp

Genome Length

3892138 bp

Protein-coding Genes

3682 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
atp-dependent clp protease adapter clps	C6Y53_RS10085	Not Available	Negative	2022161 - 2022505	13142.0
had family hydrolase	C6Y53_RS10090	Not Available	Positive	2022601 - 2023296	25455.5
d-alanyl-d-alanine carboxypeptidase family protein	C6Y53_RS10095	Not Available	Positive	2023552 - 2025237	58772.8
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab	C6Y53_RS10100	Not Available	Negative	2025267 - 2026520	45916.1
diaminopimelate epimerase	C6Y53_RS10105	Not Available	Negative	2026517 - 2027359	29763.4
sulfatase-like hydrolase/transferase	C6Y53_RS10110	Not Available	Negative	2027420 - 2029060	60623.3
Trna-lys	Not Available	Not Available	Positive	2029288 - 2029363	Not Available
tyrosine recombinase xerc	C6Y53_RS10120	Not Available	Negative	2029368 - 2030486	41722.1
hypothetical protein	C6Y53_RS21010	Not Available	Negative	2030483 - 2030656	6584.85
hypothetical protein	C6Y53_RS21015	Not Available	Negative	2030673 - 2031131	17464.9

Displaying genes 2041 – 2050 of 3836 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.