Pukyongiella litopenaei

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pukyongiella

Description

Pukyongiella litopenaei is a bacterium characterized by having two replicons. The organism is cataloged under the accession numbers NZ_CP043623.1 and NZ_CP027665.1, which provide genetic information essential for its identification and classification. This species contributes to our understanding of microbial diversity and the ecological roles that bacteria play in various environments. The presence of two replicons may suggest a complex regulatory mechanism for gene expression and replication, potentially allowing Pukyongiella litopenaei to adapt to changing environmental conditions. Further studies of Pukyongiella litopenaei may reveal its ecological interactions and potential applications in biotechnology or environmental science, given the diverse roles that bacteria play in ecosystems. Understanding the genomic features associated with this organism can provide insights into its adaptability and functionality within its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPukyongiella
SpeciesPukyongiella litopenaei
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pukyongiella litopenaei strain SH-1 chromosome, complete genome.

Gene Summary

Adenine Count

659597 bp

Thymine Count

659520 bp

Guanine Count

1286479 bp

Cytosine Count

1286542 bp

Genome Length

3892138 bp

Protein-coding Genes

3682 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-coa dehydrogenase family proteinC6Y53_RS08185Not AvailableNegative1619317 - 162050743505.8
3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing proteinC6Y53_RS08190Not AvailableNegative1620535 - 162261974099.0
hypothetical proteinC6Y53_RS08195Not AvailableNegative1622736 - 162373734618.9
caspase family proteinC6Y53_RS08200Not AvailablePositive1623932 - 162542553942.7
m15 family metallopeptidaseC6Y53_RS08205Not AvailableNegative1625462 - 162630130761.1
ompa family proteinC6Y53_RS08210Not AvailablePositive1626471 - 162704920226.9
serine/threonine protein kinaseC6Y53_RS08215Not AvailablePositive1627095 - 162928476333.2
pp2c family protein-serine/threonine phosphataseC6Y53_RS08220Not AvailableNegative1629288 - 163001025270.3
type vi secretion system-associated protein tagfC6Y53_RS08225Not AvailableNegative1630007 - 163068723830.8
type vi secretion system membrane subunit tssmC6Y53_RS08230Not AvailableNegative1630687 - 1634253131026.0

Displaying genes 1661 – 1670 of 3836 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.