Pukyongiella litopenaei

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pukyongiella

Description

Pukyongiella litopenaei is a bacterium characterized by having two replicons. The organism is cataloged under the accession numbers NZ_CP043623.1 and NZ_CP027665.1, which provide genetic information essential for its identification and classification. This species contributes to our understanding of microbial diversity and the ecological roles that bacteria play in various environments. The presence of two replicons may suggest a complex regulatory mechanism for gene expression and replication, potentially allowing Pukyongiella litopenaei to adapt to changing environmental conditions. Further studies of Pukyongiella litopenaei may reveal its ecological interactions and potential applications in biotechnology or environmental science, given the diverse roles that bacteria play in ecosystems. Understanding the genomic features associated with this organism can provide insights into its adaptability and functionality within its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPukyongiella
SpeciesPukyongiella litopenaei
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pukyongiella litopenaei strain SH-1 chromosome, complete genome.

Gene Summary

Adenine Count

659597 bp

Thymine Count

659520 bp

Guanine Count

1286479 bp

Cytosine Count

1286542 bp

Genome Length

3892138 bp

Protein-coding Genes

3682 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hemin uptake protein hempC6Y53_RS07085Not AvailableNegative1395610 - 139739963513.5
neutral zinc metallopeptidaseC6Y53_RS07090Not AvailablePositive1397540 - 139838530143.4
osmc family proteinC6Y53_RS07095Not AvailableNegative1398412 - 139881613802.8
trap transporter substrate-binding protein dctpC6Y53_RS07100Not AvailablePositive1399159 - 140008533877.9
trap transporter small permeaseC6Y53_RS07105Not AvailablePositive1400101 - 140064019210.5
trap transporter large permeaseC6Y53_RS07110Not AvailablePositive1400640 - 140192944963.7
is3 family transposaseC6Y53_RS07115Not AvailableNegative1402444 - 140367546336.3
hemin uptake protein hempC6Y53_RS07120Not AvailablePositive1403730 - 140429021244.6
hemin uptake protein hempC6Y53_RS07125Not AvailableNegative1404344 - 140497122271.5
m20 family metallopeptidaseC6Y53_RS07130Not AvailableNegative1405101 - 140648650165.2

Displaying genes 1441 – 1450 of 3836 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.