Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase family protein | FHY55_RS04795 | Not Available | Positive | 917421 - 918272 | 29265.9 |
| bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family protein | FHY55_RS04800 | Not Available | Positive | 918269 - 920158 | 68945.9 |
| 3-keto-5-aminohexanoate cleavage protein | FHY55_RS04805 | Not Available | Negative | 920228 - 921061 | 29717.2 |
| alpha/beta fold hydrolase | FHY55_RS04810 | Not Available | Negative | 921058 - 921894 | 30504.2 |
| hypothetical protein | FHY55_RS04815 | Not Available | Negative | 921891 - 922271 | 14119.5 |
| dioxygenase | FHY55_RS04820 | Not Available | Positive | 922434 - 923309 | 32392.0 |
| abc transporter atp-binding protein | FHY55_RS04825 | Not Available | Positive | 923501 - 925201 | 62261.8 |
| marr family winged helix-turn-helix transcriptional regulator | FHY55_RS04830 | Not Available | Positive | 925270 - 925746 | 17465.0 |
| tonb-dependent receptor plug domain-containing protein | FHY55_RS04835 | Not Available | Negative | 925801 - 927753 | 70347.1 |
| laci family dna-binding transcriptional regulator | FHY55_RS04840 | Not Available | Positive | 928153 - 929163 | 36786.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
