Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | FHY55_RS04745 | Not Available | Positive | 905870 - 907492 | 57984.2 |
| aminopeptidase p family protein | FHY55_RS04750 | Not Available | Positive | 907677 - 908879 | 44407.4 |
| phytanoyl-coa dioxygenase family protein | FHY55_RS04755 | Not Available | Negative | 908886 - 909716 | 30907.5 |
| urate hydroxylase puud | FHY55_RS04760 | Not Available | Negative | 909739 - 910974 | 46023.1 |
| ureidoglycolate lyase | FHY55_RS04765 | Not Available | Positive | 911289 - 911774 | 17291.6 |
| 3-hydroxy-d-aspartate aldolase bhcc | FHY55_RS04770 | Not Available | Negative | 911787 - 912953 | 41489.7 |
| lysr family transcriptional regulator | FHY55_RS04775 | Not Available | Positive | 913176 - 914102 | 34173.4 |
| tripartite tricarboxylate transporter substrate binding protein | FHY55_RS04780 | Not Available | Positive | 914222 - 915223 | 34744.4 |
| tripartite tricarboxylate transporter tctb family protein | FHY55_RS04785 | Not Available | Positive | 915335 - 915913 | 20497.6 |
| tripartite tricarboxylate transporter permease | FHY55_RS04790 | Not Available | Positive | 915910 - 917424 | 53427.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
