Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | FHY55_RS04595 | Not Available | Negative | 875659 - 876393 | 25694.5 |
| amidohydrolase family protein | FHY55_RS04600 | Not Available | Positive | 876497 - 877324 | 30135.0 |
| l-rhamnose mutarotase | FHY55_RS04605 | Not Available | Positive | 877336 - 877665 | 12707.1 |
| aldo/keto reductase | FHY55_RS04610 | Not Available | Negative | 877681 - 878643 | 34987.3 |
| sugar abc transporter atp-binding protein | FHY55_RS04615 | Not Available | Positive | 878849 - 880369 | 55219.9 |
| abc transporter permease | FHY55_RS04620 | Not Available | Positive | 880386 - 881390 | 34725.6 |
| abc transporter substrate-binding protein | FHY55_RS04625 | Not Available | Positive | 881457 - 882380 | 31880.8 |
| sdr family nad(p)-dependent oxidoreductase | FHY55_RS04630 | Not Available | Negative | 882463 - 883191 | 25614.0 |
| duf3833 domain-containing protein | FHY55_RS04635 | Not Available | Negative | 883184 - 883750 | 20467.5 |
| sam-dependent methyltransferase | FHY55_RS04640 | Not Available | Negative | 883762 - 884961 | 44503.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
