Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease r | FHY55_RS00270 | Not Available | Positive | 48511 - 50766 | 82764.1 |
| lytic murein transglycosylase | FHY55_RS00275 | Not Available | Positive | 50837 - 52090 | 44988.2 |
| hypothetical protein | FHY55_RS00280 | Not Available | Positive | 52366 - 52752 | 14089.7 |
| hypothetical protein | FHY55_RS00285 | Not Available | Positive | 52818 - 53138 | 11685.8 |
| hypothetical protein | FHY55_RS00290 | Not Available | Positive | 53147 - 53752 | 22463.5 |
| sodium:calcium antiporter | FHY55_RS00295 | Not Available | Negative | 53788 - 54819 | 35187.1 |
| glsb/yeaq/ymge family stress response membrane protein | FHY55_RS00300 | Not Available | Negative | 54824 - 55075 | 8614.32 |
| hypothetical protein | FHY55_RS00305 | Not Available | Negative | 55171 - 56040 | 32011.2 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | FHY55_RS00310 | Not Available | Negative | 56080 - 56907 | 29321.9 |
| tigr00730 family rossman fold protein | FHY55_RS00315 | Not Available | Positive | 57039 - 57878 | 30722.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
