Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rsmb/nop family class i sam-dependent rna methyltransferase | FHY55_RS00170 | Not Available | Negative | 32638 - 33861 | 42714.6 |
| duf1674 domain-containing protein | FHY55_RS00175 | Not Available | Positive | 33932 - 34117 | 6848.02 |
| 4-hydroxy-tetrahydrodipicolinate reductase | FHY55_RS00180 | Not Available | Negative | 34194 - 35012 | 28310.2 |
| 30s ribosome-binding factor rbfa | FHY55_RS00185 | Not Available | Positive | 35113 - 35532 | 15930.8 |
| phosphodiester glycosidase family protein | FHY55_RS00190 | Not Available | Positive | 35516 - 36265 | 26863.4 |
| dna mismatch repair endonuclease mutl | FHY55_RS00195 | Not Available | Positive | 36368 - 38224 | 66779.6 |
| dna recombination protein rmuc | FHY55_RS00200 | Not Available | Positive | 38221 - 39459 | 44064.7 |
| sdr family nad(p)-dependent oxidoreductase | FHY55_RS00205 | Not Available | Positive | 39626 - 40378 | 26738.1 |
| duf3775 domain-containing protein | FHY55_RS00210 | Not Available | Positive | 40432 - 40758 | 11990.0 |
| rhodanese-like domain-containing protein | FHY55_RS00215 | Not Available | Negative | 40826 - 41218 | 14129.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
