Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | FHY55_RS02800 | Not Available | Positive | 534098 - 534769 | 24019.0 |
| pantoate--beta-alanine ligase | FHY55_RS02805 | Not Available | Negative | 534794 - 535639 | 29960.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | FHY55_RS02810 | Not Available | Negative | 535636 - 536463 | 28921.0 |
| ykof family thiamine/hydroxymethylpyrimidine-binding protein | FHY55_RS02815 | Not Available | Positive | 536782 - 537393 | 21991.2 |
| abc transporter permease | FHY55_RS02820 | Not Available | Positive | 537436 - 538197 | 27376.3 |
| abc transporter atp-binding protein | FHY55_RS02825 | Not Available | Positive | 538190 - 538942 | 26980.0 |
| abc transporter substrate-binding protein | FHY55_RS02830 | Not Available | Positive | 538939 - 539916 | 34763.4 |
| trap transporter large permease | FHY55_RS02835 | Not Available | Negative | 540104 - 541399 | 45220.8 |
| trap transporter small permease | FHY55_RS02840 | Not Available | Negative | 541396 - 541956 | 21133.3 |
| trap transporter substrate-binding protein dctp | FHY55_RS02845 | Not Available | Negative | 542008 - 542967 | 34730.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
