Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 3984238 - 3987066 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 3987384 - 3987460 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3987464 - 3987539 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3987688 - 3989155 | Not Available |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | FHY55_RS20070 | Not Available | Negative | 3989924 - 3990532 | 22677.9 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | FHY55_RS20075 | Not Available | Negative | 3990540 - 3991448 | 33816.2 |
| fmn-binding glutamate synthase family protein | FHY55_RS20080 | Not Available | Negative | 3991546 - 3993045 | 54441.7 |
| endonuclease/exonuclease/phosphatase family protein | FHY55_RS20085 | Not Available | Negative | 3993106 - 3994068 | 35951.5 |
| sdr family nad(p)-dependent oxidoreductase | FHY55_RS20090 | Not Available | Negative | 3994150 - 3994896 | 25745.9 |
| atp-dependent chaperone clpb | FHY55_RS20095 | Not Available | Negative | 3994984 - 3997599 | 95284.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
