Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-4-deoxyglucarate dehydratase | FHY55_RS19065 | Not Available | Positive | 3790341 - 3791246 | 32546.2 |
| trap transporter substrate-binding protein | FHY55_RS19070 | Not Available | Positive | 3791527 - 3792567 | 37330.2 |
| trap transporter large permease subunit | FHY55_RS19075 | Not Available | Positive | 3792695 - 3794770 | 74506.9 |
| dihydroxy-acid dehydratase | FHY55_RS19080 | Not Available | Positive | 3794781 - 3794903 | 4468.57 |
| l-arabinonate dehydratase | FHY55_RS19085 | Not Available | Positive | 3794914 - 3796644 | 62541.2 |
| l-talarate/galactarate dehydratase | FHY55_RS19090 | Not Available | Positive | 3796644 - 3797843 | 43597.4 |
| uxaa family hydrolase | FHY55_RS19095 | Not Available | Positive | 3797855 - 3799390 | 54988.8 |
| smp-30/gluconolactonase/lre family protein | FHY55_RS19100 | Not Available | Negative | 3799470 - 3800312 | 30316.6 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | FHY55_RS19105 | Not Available | Negative | 3800309 - 3800911 | 20006.5 |
| 2-dehydro-3-deoxygalactonokinase | FHY55_RS19110 | Not Available | Negative | 3800908 - 3801810 | 31242.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
