Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | FHY55_RS18665 | Not Available | Positive | 3711076 - 3712107 | 37745.9 |
| duf2474 domain-containing protein | FHY55_RS18670 | Not Available | Positive | 3712107 - 3712202 | 3285.31 |
| acyl-coa thioesterase | FHY55_RS18675 | Not Available | Positive | 3712211 - 3712651 | 16243.1 |
| winged helix-turn-helix domain-containing protein | FHY55_RS18680 | Not Available | Positive | 3712896 - 3714062 | 44385.4 |
| dna topoisomerase (atp-hydrolyzing) subunit b | FHY55_RS18685 | Not Available | Negative | 3714091 - 3716508 | 89035.0 |
| caspase family protein | FHY55_RS18690 | Not Available | Negative | 3716593 - 3719811 | 116561.0 |
| lyse family translocator | FHY55_RS18695 | Not Available | Negative | 3719860 - 3720480 | 21678.4 |
| duf1697 domain-containing protein | FHY55_RS20680 | Not Available | Negative | 3720477 - 3720674 | 6889.6 |
| dna replication/repair protein recf | FHY55_RS18705 | Not Available | Negative | 3720671 - 3721789 | 40000.9 |
| type ii toxin-antitoxin system pemk/mazf family toxin | FHY55_RS18710 | Not Available | Negative | 3721963 - 3722313 | 12758.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
