Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate--trna ligase | FHY55_RS17230 | Not Available | Negative | 3452316 - 3454097 | 66317.8 |
| sam-dependent methyltransferase | FHY55_RS17235 | Not Available | Positive | 3454272 - 3455501 | 46223.5 |
| carbamoyl-phosphate synthase large subunit | FHY55_RS17240 | Not Available | Positive | 3455814 - 3459167 | 120843.0 |
| brna antitoxin family protein | FHY55_RS17245 | Not Available | Negative | 3459286 - 3459687 | 15862.1 |
| thymidine kinase | FHY55_RS17250 | Not Available | Positive | 3459853 - 3460431 | 21234.6 |
| pp_03447 | FHY55_RS17255 | Not Available | Negative | 3460428 - 3460766 | Not Available |
| pyrroline-5-carboxylate reductase | FHY55_RS17260 | Not Available | Negative | 3460763 - 3461563 | 27091.9 |
| ybjn domain-containing protein | FHY55_RS17265 | Not Available | Negative | 3461592 - 3462095 | 18848.3 |
| accessory factor ubik family protein | FHY55_RS17270 | Not Available | Negative | 3462370 - 3462615 | 9233.91 |
| prolipoprotein diacylglyceryl transferase | FHY55_RS17275 | Not Available | Positive | 3462718 - 3463647 | 34307.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
