Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol dehydrogenase family protein | FHY55_RS16890 | Not Available | Negative | 3393965 - 3395437 | 52073.2 |
| mannonate dehydratase | FHY55_RS16895 | Not Available | Negative | 3395434 - 3396642 | 44405.8 |
| gntr family transcriptional regulator | FHY55_RS16900 | Not Available | Positive | 3396754 - 3397500 | 27413.8 |
| trap transporter substrate-binding protein | FHY55_RS16905 | Not Available | Positive | 3397497 - 3398468 | 35230.0 |
| trap transporter small permease | FHY55_RS16910 | Not Available | Positive | 3398544 - 3399050 | 17935.5 |
| trap transporter large permease | FHY55_RS16915 | Not Available | Positive | 3399055 - 3400332 | 44165.3 |
| l-idonate 5-dehydrogenase | FHY55_RS16920 | Not Available | Positive | 3400343 - 3401389 | 35783.0 |
| copper-containing nitrite reductase | FHY55_RS16925 | Not Available | Positive | 3401975 - 3403123 | 42122.2 |
| formylglycine-generating enzyme family protein | FHY55_RS16930 | Not Available | Positive | 3403200 - 3403997 | 27808.9 |
| nnru family protein | FHY55_RS16935 | Not Available | Negative | 3404116 - 3404385 | 9451.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
