Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smp-30/gluconolactonase/lre family protein | FHY55_RS16840 | Not Available | Negative | 3384658 - 3385557 | 32241.0 |
| nad-dependent epimerase/dehydratase family protein | FHY55_RS16845 | Not Available | Negative | 3385561 - 3386385 | 29601.1 |
| trap transporter large permease | FHY55_RS16850 | Not Available | Negative | 3386358 - 3387641 | 44968.4 |
| trap transporter small permease | FHY55_RS16855 | Not Available | Negative | 3387645 - 3388160 | 19025.9 |
| c4-dicarboxylate trap transporter substrate-binding protein | FHY55_RS16860 | Not Available | Negative | 3388248 - 3389249 | 35599.5 |
| iclr family transcriptional regulator c-terminal domain-containing protein | FHY55_RS16865 | Not Available | Positive | 3389510 - 3391129 | 55258.1 |
| ribonuclease activity regulator rraa | FHY55_RS16870 | Not Available | Positive | 3391153 - 3391884 | 27002.0 |
| nuclear transport factor 2 family protein | FHY55_RS16875 | Not Available | Positive | 3391881 - 3392345 | 17500.6 |
| ycii family protein | FHY55_RS16880 | Not Available | Positive | 3392345 - 3392632 | 10449.5 |
| mannonate dehydratase | FHY55_RS16885 | Not Available | Positive | 3392636 - 3393685 | 37769.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
