Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb family protein | FHY55_RS16000 | Not Available | Positive | 3195240 - 3195710 | 16229.8 |
| tripartite tricarboxylate transporter permease | FHY55_RS16005 | Not Available | Positive | 3195710 - 3197236 | 52825.3 |
| trap transporter permease | FHY55_RS16010 | Not Available | Negative | 3197340 - 3199541 | 77242.1 |
| taxi family trap transporter solute-binding subunit | FHY55_RS16015 | Not Available | Negative | 3199642 - 3200610 | 34154.9 |
| lysr family transcriptional regulator | FHY55_RS16020 | Not Available | Negative | 3200734 - 3201648 | 33187.5 |
| tartrate dehydrogenase | FHY55_RS16025 | Not Available | Positive | 3201841 - 3202914 | 38696.2 |
| glycerate kinase | FHY55_RS16030 | Not Available | Positive | 3202924 - 3204183 | 42824.2 |
| tim barrel protein | FHY55_RS16035 | Not Available | Negative | 3204285 - 3205064 | 28286.6 |
| 5-deoxy-glucuronate isomerase | FHY55_RS16040 | Not Available | Negative | 3205066 - 3205872 | 29872.3 |
| myo-inosose-2 dehydratase | FHY55_RS16045 | Not Available | Negative | 3205878 - 3206783 | 33237.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
