Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | FHY55_RS15950 | Not Available | Negative | 3185855 - 3186796 | 33971.0 |
| alpha/beta hydrolase | FHY55_RS15955 | Not Available | Negative | 3186885 - 3187736 | 30266.8 |
| trap transporter large permease | FHY55_RS15960 | Not Available | Negative | 3187738 - 3189024 | 45018.9 |
| trap transporter small permease | FHY55_RS15965 | Not Available | Negative | 3189035 - 3189556 | 19571.2 |
| trap transporter substrate-binding protein dctp | FHY55_RS15970 | Not Available | Negative | 3189553 - 3190569 | 36014.1 |
| duf3237 domain-containing protein | FHY55_RS15975 | Not Available | Positive | 3190793 - 3191272 | 17548.2 |
| fadr/gntr family transcriptional regulator | FHY55_RS15980 | Not Available | Negative | 3191330 - 3192037 | 26003.9 |
| gfo/idh/moca family protein | FHY55_RS15985 | Not Available | Negative | 3192090 - 3193085 | 36417.0 |
| dihydrodipicolinate synthase family protein | FHY55_RS15990 | Not Available | Positive | 3193168 - 3194124 | 33473.2 |
| tripartite tricarboxylate transporter substrate binding protein | FHY55_RS15995 | Not Available | Positive | 3194156 - 3195151 | 33588.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
