Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | FHY55_RS15800 | Not Available | Positive | 3156726 - 3157727 | 37211.4 |
| trap transporter small permease | FHY55_RS15805 | Not Available | Positive | 3157769 - 3158296 | 19355.4 |
| trap transporter large permease | FHY55_RS15810 | Not Available | Positive | 3158293 - 3159579 | 45170.5 |
| carbon-nitrogen hydrolase family protein | FHY55_RS15815 | Not Available | Positive | 3159628 - 3160440 | 29901.7 |
| aldolase/citrate lyase family protein | FHY55_RS15820 | Not Available | Positive | 3160443 - 3161180 | 26701.1 |
| rraa family protein | FHY55_RS15825 | Not Available | Positive | 3161185 - 3161850 | 23347.9 |
| lysr family transcriptional regulator | FHY55_RS15830 | Not Available | Positive | 3161852 - 3162811 | 34964.5 |
| tyramine oxidase | FHY55_RS15835 | Not Available | Negative | 3162944 - 3164929 | 74283.2 |
| aldehyde dehydrogenase family protein | FHY55_RS15840 | Not Available | Negative | 3165024 - 3166484 | 51412.5 |
| helix-turn-helix domain-containing protein | FHY55_RS15845 | Not Available | Negative | 3166574 - 3167584 | 36910.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
