Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase family protein | FHY55_RS15515 | Not Available | Negative | 3096578 - 3097231 | 23926.6 |
| m24 family metallopeptidase | FHY55_RS15520 | Not Available | Positive | 3097391 - 3098608 | 43953.2 |
| helix-turn-helix domain-containing protein | FHY55_RS15525 | Not Available | Negative | 3098929 - 3099798 | 31199.3 |
| hypothetical protein | FHY55_RS15530 | Not Available | Negative | 3099795 - 3100577 | 27813.6 |
| hypothetical protein | FHY55_RS15535 | Not Available | Negative | 3100607 - 3100873 | 9682.58 |
| murein l,d-transpeptidase catalytic domain-containing protein | FHY55_RS15540 | Not Available | Positive | 3101456 - 3102406 | 35426.7 |
| yqaa family protein | FHY55_RS15545 | Not Available | Positive | 3102444 - 3102872 | 15465.3 |
| dmt family transporter | FHY55_RS15550 | Not Available | Positive | 3102924 - 3103856 | 33410.3 |
| thiamine diphosphokinase | FHY55_RS15555 | Not Available | Negative | 3103786 - 3104466 | 23797.8 |
| hypothetical protein | FHY55_RS15560 | Not Available | Positive | 3104605 - 3108171 | 123573.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
