Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | FHY55_RS14425 | Not Available | Positive | 2892491 - 2893993 | 53476.9 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | FHY55_RS14430 | Not Available | Positive | 2894063 - 2895043 | 37387.1 |
| nad-dependent succinate-semialdehyde dehydrogenase | FHY55_RS14435 | Not Available | Positive | 2895214 - 2896668 | 51541.7 |
| fumarylacetoacetate hydrolase family protein | FHY55_RS14440 | Not Available | Positive | 2896715 - 2897566 | 30714.4 |
| paax family transcriptional regulator c-terminal domain-containing protein | FHY55_RS14445 | Not Available | Negative | 2897588 - 2898340 | 26125.6 |
| phenylacetic acid degradation bifunctional protein paaz | FHY55_RS14450 | Not Available | Negative | 2898365 - 2900386 | 70879.1 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase paag | FHY55_RS14455 | Not Available | Positive | 2900466 - 2901248 | 27385.8 |
| hydroxyphenylacetyl-coa thioesterase paai | FHY55_RS14460 | Not Available | Positive | 2901245 - 2901682 | 15236.9 |
| phenylacetate--coa ligase paak | FHY55_RS14465 | Not Available | Positive | 2901679 - 2902980 | 47593.9 |
| tetr/acrr family transcriptional regulator | FHY55_RS14470 | Not Available | Positive | 2902984 - 2903592 | 22834.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
