Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | FHY55_RS14180 | Not Available | Positive | 2831443 - 2831928 | 16846.9 |
| hcp family type vi secretion system effector | FHY55_RS14185 | Not Available | Positive | 2832157 - 2832639 | 17278.7 |
| type vi secretion system baseplate subunit tsse | FHY55_RS14190 | Not Available | Positive | 2832801 - 2833355 | 20876.9 |
| type vi secretion system baseplate subunit tssf | FHY55_RS14195 | Not Available | Positive | 2833352 - 2835313 | 74259.7 |
| type vi secretion system baseplate subunit tssg | FHY55_RS14200 | Not Available | Positive | 2835310 - 2836392 | 41057.8 |
| type vi secretion system atpase tssh | FHY55_RS14205 | Not Available | Positive | 2836426 - 2839239 | 101141.0 |
| hypothetical protein | FHY55_RS20560 | Not Available | Positive | 2839489 - 2839656 | 5979.22 |
| glycerate kinase | FHY55_RS14210 | Not Available | Negative | 2839683 - 2840930 | 41979.1 |
| flgo family outer membrane protein | FHY55_RS14215 | Not Available | Positive | 2841100 - 2842818 | 63572.4 |
| phosphatase pap2 family protein | FHY55_RS14220 | Not Available | Positive | 2842840 - 2844024 | 40018.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
