Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ivb secretion system protein icmh/dotu | FHY55_RS14130 | Not Available | Negative | 2810045 - 2811739 | 60360.8 |
| type vi secretion system baseplate subunit tssk | FHY55_RS14135 | Not Available | Negative | 2811739 - 2813076 | 50769.8 |
| beta strand repeat-containing protein | FHY55_RS14140 | Not Available | Negative | 2813305 - 2821833 | 274698.0 |
| type vi secretion system vgr family protein | FHY55_RS14145 | Not Available | Positive | 2822242 - 2824260 | 74641.7 |
| duf6931 family protein | FHY55_RS14150 | Not Available | Positive | 2824282 - 2824875 | 21708.8 |
| type vi secretion system-associated fha domain protein tagh | FHY55_RS14155 | Not Available | Positive | 2825221 - 2826846 | 55428.3 |
| ompa family protein | FHY55_RS14160 | Not Available | Positive | 2826964 - 2827479 | 18427.7 |
| impa family type vi secretion system protein | FHY55_RS14165 | Not Available | Positive | 2827671 - 2829029 | 48577.2 |
| type vi secretion system contractile sheath small subunit | FHY55_RS14170 | Not Available | Positive | 2829125 - 2829664 | 19910.3 |
| type vi secretion system contractile sheath large subunit | FHY55_RS14175 | Not Available | Positive | 2829760 - 2831250 | 54949.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
