Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FHY55_RS12935 | Not Available | Negative | 2550762 - 2552927 | 80784.6 |
| duf2924 domain-containing protein | FHY55_RS12945 | Not Available | Positive | 2553315 - 2553770 | 17376.8 |
| recombinase family protein | FHY55_RS12950 | Not Available | Positive | 2553767 - 2555092 | 49003.7 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | FHY55_RS12960 | Not Available | Positive | 2555551 - 2555754 | 7308.81 |
| class i sam-dependent dna methyltransferase | FHY55_RS12965 | Not Available | Positive | 2555828 - 2557804 | 75679.0 |
| restriction endonuclease subunit s | FHY55_RS12970 | Not Available | Positive | 2557801 - 2559039 | 45786.5 |
| aaa family atpase | FHY55_RS12975 | Not Available | Positive | 2559036 - 2560283 | 45588.3 |
| retron system putative hnh endonuclease | FHY55_RS12980 | Not Available | Positive | 2560286 - 2560909 | 23382.6 |
| type i restriction endonuclease subunit r | FHY55_RS12985 | Not Available | Positive | 2560906 - 2563947 | 115284.0 |
| giy-yig nuclease family protein | FHY55_RS12990 | Not Available | Positive | 2564146 - 2564928 | 28177.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
