Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific dna-methyltransferase | FHY55_RS12885 | Not Available | Negative | 2541013 - 2542272 | 45810.7 |
| lysr substrate-binding domain-containing protein | FHY55_RS12890 | Not Available | Negative | 2542578 - 2543456 | 31750.0 |
| sdr family oxidoreductase | FHY55_RS12895 | Not Available | Positive | 2543555 - 2544259 | 24457.3 |
| duf6552 family protein | FHY55_RS12900 | Not Available | Positive | 2544249 - 2544500 | 8897.1 |
| is1182 family transposase | FHY55_RS12905 | Not Available | Positive | 2544628 - 2546013 | 52589.5 |
| bifunctional dna primase/polymerase | FHY55_RS12910 | Not Available | Negative | 2546125 - 2549157 | 109562.0 |
| helix-turn-helix transcriptional regulator | FHY55_RS12915 | Not Available | Negative | 2549161 - 2549379 | 8227.77 |
| hypothetical protein | FHY55_RS12920 | Not Available | Negative | 2549379 - 2549558 | 6983.07 |
| sigma-70 family rna polymerase sigma factor | FHY55_RS12925 | Not Available | Negative | 2549639 - 2550346 | 26305.8 |
| hypothetical protein | FHY55_RS12930 | Not Available | Negative | 2550470 - 2550670 | 7327.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
