Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | FHY55_RS12835 | Not Available | Positive | 2534160 - 2534543 | 14234.3 |
| nad(p)-dependent oxidoreductase | FHY55_RS12840 | Not Available | Positive | 2534543 - 2535424 | 30171.1 |
| trap transporter substrate-binding protein | FHY55_RS12845 | Not Available | Positive | 2535483 - 2536511 | 36101.5 |
| trap transporter small permease | FHY55_RS12850 | Not Available | Positive | 2536508 - 2537041 | 19192.8 |
| trap transporter large permease | FHY55_RS12855 | Not Available | Positive | 2537038 - 2538330 | 44954.0 |
| recombinase family protein | FHY55_RS12860 | Not Available | Negative | 2538451 - 2539155 | 24983.1 |
| phage terminase small subunit p27 family | FHY55_RS12865 | Not Available | Negative | 2539229 - 2539714 | 18003.5 |
| phage terminase small subunit p27 family | FHY55_RS12870 | Not Available | Negative | 2539762 - 2540151 | 14092.6 |
| hypothetical protein | FHY55_RS20765 | Not Available | Negative | 2540367 - 2540807 | 16280.3 |
| hypothetical protein | FHY55_RS12880 | Not Available | Negative | 2540807 - 2541016 | 7508.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
