Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase | FHY55_RS12785 | Not Available | Negative | 2525499 - 2525876 | 13457.2 |
| alpha/beta fold hydrolase | FHY55_RS12790 | Not Available | Negative | 2525873 - 2526673 | 28600.8 |
| nuclear transport factor 2 family protein | FHY55_RS12795 | Not Available | Negative | 2526673 - 2527137 | 16674.9 |
| helix-turn-helix domain-containing protein | FHY55_RS12800 | Not Available | Negative | 2527134 - 2527946 | 28824.3 |
| fumarylacetoacetate hydrolase family protein | FHY55_RS12805 | Not Available | Positive | 2528027 - 2529004 | 35276.9 |
| 2fe-2s iron-sulfur cluster-binding protein | FHY55_RS12810 | Not Available | Negative | 2529048 - 2529371 | 11030.0 |
| cytochrome p450 | FHY55_RS12815 | Not Available | Negative | 2529368 - 2530549 | 43035.6 |
| lysr family transcriptional regulator | FHY55_RS12820 | Not Available | Positive | 2530631 - 2531560 | 33779.9 |
| lysr family transcriptional regulator | FHY55_RS12825 | Not Available | Negative | 2531562 - 2532497 | 34761.8 |
| aldehyde dehydrogenase family protein | FHY55_RS12830 | Not Available | Positive | 2532680 - 2534086 | 49153.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
