Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | FHY55_RS12535 | Not Available | Positive | 2472977 - 2473849 | 32540.6 |
| carbohydrate abc transporter permease | FHY55_RS12540 | Not Available | Positive | 2473860 - 2474696 | 31490.9 |
| duf2160 family membrane protein | FHY55_RS12545 | Not Available | Positive | 2474701 - 2474943 | 9033.06 |
| nad(p)-dependent alcohol dehydrogenase | FHY55_RS12550 | Not Available | Positive | 2474948 - 2476000 | 37048.7 |
| abc transporter atp-binding protein | FHY55_RS12555 | Not Available | Positive | 2476019 - 2477080 | 38816.2 |
| had family hydrolase | FHY55_RS12560 | Not Available | Positive | 2477077 - 2477784 | 25264.0 |
| xylulokinase | FHY55_RS12565 | Not Available | Positive | 2477789 - 2479240 | 51219.9 |
| l-rhamnose isomerase | FHY55_RS12570 | Not Available | Negative | 2479261 - 2480499 | 45774.2 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | FHY55_RS12575 | Not Available | Negative | 2480523 - 2482625 | 76052.5 |
| deor/glpr family dna-binding transcription regulator | FHY55_RS12580 | Not Available | Positive | 2482816 - 2483622 | 29296.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
