Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | FHY55_RS01110 | Not Available | Positive | 215655 - 216269 | 22533.1 |
| sis domain-containing protein | FHY55_RS01115 | Not Available | Positive | 216285 - 217256 | 33758.0 |
| lps export abc transporter periplasmic protein lptc | FHY55_RS01120 | Not Available | Positive | 217273 - 217890 | 21711.4 |
| lpta/osta family protein | FHY55_RS01125 | Not Available | Positive | 217908 - 218411 | 17739.3 |
| lps export abc transporter atp-binding protein | FHY55_RS01130 | Not Available | Positive | 218483 - 219184 | 26142.9 |
| rna polymerase sigma-54 factor | FHY55_RS01135 | Not Available | Positive | 219197 - 220504 | 45901.5 |
| ribosome hibernation-promoting factor, hpf/yfia family | FHY55_RS01140 | Not Available | Positive | 220613 - 221185 | 21170.0 |
| pts sugar transporter subunit iia | FHY55_RS01145 | Not Available | Positive | 221225 - 221689 | 16564.0 |
| nodulation protein nodh | FHY55_RS01150 | Not Available | Negative | 221697 - 223133 | 53699.0 |
| beta-1,6-n-acetylglucosaminyltransferase | FHY55_RS01155 | Not Available | Negative | 223141 - 224844 | 64851.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
