Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase | FHY55_RS10490 | Not Available | Negative | 2070577 - 2071509 | 34101.2 |
| hypothetical protein | FHY55_RS10495 | Not Available | Negative | 2071515 - 2072996 | 52206.2 |
| hypothetical protein | FHY55_RS20885 | Not Available | Negative | 2073062 - 2073196 | 4949.25 |
| shikimate kinase | FHY55_RS10500 | Not Available | Positive | 2073326 - 2073871 | 19738.9 |
| 3-dehydroquinate synthase | FHY55_RS10505 | Not Available | Positive | 2073890 - 2074999 | 39177.4 |
| hypothetical protein | FHY55_RS10510 | Not Available | Positive | 2075228 - 2075857 | 21996.5 |
| single-stranded dna-binding protein | FHY55_RS10515 | Not Available | Negative | 2075924 - 2076442 | 18176.8 |
| lytic transglycosylase domain-containing protein | FHY55_RS10520 | Not Available | Positive | 2076679 - 2077224 | 19841.0 |
| hypothetical protein | FHY55_RS10525 | Not Available | Positive | 2077235 - 2077681 | 16544.7 |
| ydei/ompd-associated family protein | FHY55_RS10530 | Not Available | Positive | 2077848 - 2078045 | 7280.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
