Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system higb family toxin | FHY55_RS00860 | Not Available | Negative | 161605 - 161898 | 11361.7 |
| relaxase/mobilization nuclease domain-containing protein | FHY55_RS00865 | Not Available | Negative | 162236 - 163792 | 57754.8 |
| plasmid mobilization protein | FHY55_RS00870 | Not Available | Negative | 163786 - 164214 | 15290.6 |
| helix-turn-helix domain-containing protein | FHY55_RS00875 | Not Available | Negative | 164234 - 165085 | 31244.2 |
| gmc family oxidoreductase | FHY55_RS00880 | Not Available | Positive | 165591 - 167213 | 57728.3 |
| plp-dependent aminotransferase family protein | FHY55_RS00885 | Not Available | Negative | 167194 - 168657 | 52401.9 |
| mandelate racemase/muconate lactonizing enzyme family protein | FHY55_RS00890 | Not Available | Positive | 168753 - 169874 | 41288.8 |
| nad(p)/fad-dependent oxidoreductase | FHY55_RS00895 | Not Available | Positive | 169910 - 171163 | 45026.9 |
| extracellular solute-binding protein | FHY55_RS00900 | Not Available | Positive | 171296 - 172363 | 38598.7 |
| abc transporter atp-binding protein | FHY55_RS00905 | Not Available | Positive | 172409 - 173533 | 39813.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
