Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase protein tatb | FHY55_RS09345 | Not Available | Positive | 1842848 - 1843408 | 19860.5 |
| twin-arginine translocase subunit tatc | FHY55_RS09350 | Not Available | Positive | 1843413 - 1844273 | 31396.7 |
| atp-binding protein | FHY55_RS09355 | Not Available | Positive | 1844276 - 1845112 | 31004.7 |
| m23 family metallopeptidase | FHY55_RS09360 | Not Available | Negative | 1845268 - 1846443 | 40319.6 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | FHY55_RS09365 | Not Available | Negative | 1846496 - 1847143 | 23647.6 |
| 5'/3'-nucleotidase sure | FHY55_RS09370 | Not Available | Negative | 1847140 - 1847925 | 27797.7 |
| sdr family nad(p)-dependent oxidoreductase | FHY55_RS09375 | Not Available | Negative | 1848053 - 1848709 | 23085.6 |
| hypothetical protein | FHY55_RS09380 | Not Available | Negative | 1848841 - 1849101 | 8913.9 |
| duf2199 domain-containing protein | FHY55_RS09385 | Not Available | Negative | 1849243 - 1849905 | 23905.1 |
| duf6958 family protein | FHY55_RS09390 | Not Available | Negative | 1850230 - 1850523 | 10564.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
