Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase family protein | FHY55_RS08850 | Not Available | Negative | 1748132 - 1749091 | 33416.0 |
| transketolase | FHY55_RS08855 | Not Available | Negative | 1749088 - 1749909 | 29767.5 |
| abc transporter permease | FHY55_RS08860 | Not Available | Positive | 1750113 - 1751087 | 33307.0 |
| substrate-binding domain-containing protein | FHY55_RS08865 | Not Available | Positive | 1751199 - 1752131 | 32305.6 |
| sugar abc transporter atp-binding protein | FHY55_RS08870 | Not Available | Positive | 1752170 - 1753663 | 53642.6 |
| glucose 1-dehydrogenase | FHY55_RS08875 | Not Available | Positive | 1753695 - 1754477 | 27726.1 |
| sdr family oxidoreductase | FHY55_RS08880 | Not Available | Positive | 1754525 - 1755316 | 27824.5 |
| triose-phosphate isomerase | FHY55_RS08885 | Not Available | Positive | 1755327 - 1756076 | 25826.9 |
| l,d-transpeptidase | FHY55_RS08890 | Not Available | Negative | 1756146 - 1756865 | 25637.4 |
| hypothetical protein | FHY55_RS08895 | Not Available | Positive | 1757047 - 1757862 | 30382.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
