Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | FHY55_RS08105 | Not Available | Positive | 1588919 - 1589518 | 22213.8 |
| hypothetical protein | FHY55_RS08110 | Not Available | Positive | 1589656 - 1589862 | 7518.7 |
| host attachment family protein | FHY55_RS08115 | Not Available | Positive | 1589859 - 1590314 | 16819.8 |
| tigr00730 family rossman fold protein | FHY55_RS08120 | Not Available | Negative | 1590311 - 1590859 | 19557.5 |
| lysm peptidoglycan-binding domain-containing protein | FHY55_RS08125 | Not Available | Positive | 1590994 - 1592658 | 55043.8 |
| abcb family abc transporter atp-binding protein/permease | FHY55_RS08130 | Not Available | Positive | 1592751 - 1594553 | 65259.1 |
| efflux rnd transporter permease subunit | FHY55_RS08135 | Not Available | Negative | 1594648 - 1598454 | 136401.0 |
| efflux rnd transporter periplasmic adaptor subunit | FHY55_RS08140 | Not Available | Negative | 1598451 - 1599707 | 43782.6 |
| hypothetical protein | FHY55_RS08145 | Not Available | Positive | 1600001 - 1600654 | 23037.2 |
| pqq-like beta-propeller repeat protein | FHY55_RS08150 | Not Available | Positive | 1600725 - 1602056 | 46253.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
