Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4123 domain-containing protein | FHY55_RS08005 | Not Available | Positive | 1568049 - 1568990 | 33991.6 |
| gntr family transcriptional regulator | FHY55_RS08010 | Not Available | Negative | 1569014 - 1569667 | 24378.1 |
| trap transporter substrate-binding protein dctp | FHY55_RS08015 | Not Available | Positive | 1569806 - 1570789 | 35526.8 |
| trap transporter small permease subunit | FHY55_RS08020 | Not Available | Positive | 1570862 - 1571452 | 21270.3 |
| trap transporter large permease | FHY55_RS08025 | Not Available | Positive | 1571452 - 1572768 | 46598.3 |
| malonyl-coa decarboxylase | FHY55_RS08030 | Not Available | Positive | 1572765 - 1574012 | 45799.3 |
| malonate--coa ligase | FHY55_RS08035 | Not Available | Positive | 1574027 - 1575544 | 54056.7 |
| trna dihydrouridine(20/20a) synthase dusa | FHY55_RS08040 | Not Available | Positive | 1575630 - 1576652 | 36716.4 |
| duf1289 domain-containing protein | FHY55_RS08045 | Not Available | Negative | 1576796 - 1577032 | 9018.92 |
| holliday junction resolvase ruvx | FHY55_RS08050 | Not Available | Negative | 1577032 - 1577505 | 17000.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
