Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | FHY55_RS06820 | Not Available | Negative | 1334351 - 1334863 | 18752.2 |
| trap transporter substrate-binding protein | FHY55_RS06825 | Not Available | Negative | 1334929 - 1335939 | 36769.1 |
| murr/rpir family transcriptional regulator | FHY55_RS06830 | Not Available | Negative | 1336146 - 1337024 | 32185.1 |
| n-formylglutamate amidohydrolase | FHY55_RS06835 | Not Available | Positive | 1337119 - 1337877 | 27662.5 |
| trap transporter small permease subunit | FHY55_RS06840 | Not Available | Positive | 1337874 - 1338419 | 20499.4 |
| trap transporter large permease subunit | FHY55_RS06845 | Not Available | Positive | 1338409 - 1339737 | 48083.5 |
| trap transporter substrate-binding protein | FHY55_RS06850 | Not Available | Positive | 1339781 - 1340818 | 38323.1 |
| glutamine synthetase family protein | FHY55_RS06855 | Not Available | Positive | 1340886 - 1342250 | 50307.5 |
| hypothetical protein | FHY55_RS06860 | Not Available | Positive | 1342315 - 1342722 | 14753.1 |
| type ii toxin-antitoxin system vapc family toxin | FHY55_RS06865 | Not Available | Positive | 1342715 - 1343128 | 14920.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
