Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-associated lipoprotein pal | FHY55_RS06365 | Not Available | Positive | 1245903 - 1246424 | 18122.0 |
| tol-pal system protein ybgf | FHY55_RS06370 | Not Available | Positive | 1246426 - 1247292 | 29829.7 |
| trna lysidine(34) synthetase tils | FHY55_RS06375 | Not Available | Positive | 1247289 - 1248533 | 44462.9 |
| atp-dependent zinc metalloprotease ftsh | FHY55_RS06380 | Not Available | Positive | 1248612 - 1250534 | 69425.0 |
| mosc domain-containing protein | FHY55_RS06385 | Not Available | Positive | 1250710 - 1251294 | 20647.6 |
| formate--tetrahydrofolate ligase | FHY55_RS06390 | Not Available | Positive | 1251487 - 1253163 | 59007.1 |
| chorismate mutase | FHY55_RS06395 | Not Available | Positive | 1253163 - 1253474 | 11100.3 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | FHY55_RS06400 | Not Available | Positive | 1253529 - 1254428 | 31281.0 |
| hypothetical protein | FHY55_RS06405 | Not Available | Negative | 1254417 - 1254641 | 8292.87 |
| ligase-associated dna damage response endonuclease pdem | FHY55_RS06410 | Not Available | Negative | 1254697 - 1255353 | 23740.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
