Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | FHY55_RS00520 | Not Available | Negative | 95609 - 98977 | 120187.0 |
| efflux rnd transporter periplasmic adaptor subunit | FHY55_RS00525 | Not Available | Negative | 98978 - 100441 | 51350.0 |
| duf2268 domain-containing putative zn-dependent protease | FHY55_RS00530 | Not Available | Negative | 100592 - 101242 | 23372.6 |
| hypothetical protein | FHY55_RS00535 | Not Available | Negative | 101239 - 101568 | 12585.9 |
| ompa family protein | FHY55_RS00540 | Not Available | Negative | 101561 - 103537 | 68959.9 |
| 4-hydroxybenzoate octaprenyltransferase | FHY55_RS00545 | Not Available | Negative | 103610 - 104569 | 35042.1 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | FHY55_RS00550 | Not Available | Positive | 104582 - 105301 | 25992.4 |
| gnat family n-acetyltransferase | FHY55_RS00555 | Not Available | Positive | 105298 - 106161 | 31085.3 |
| hypothetical protein | FHY55_RS00560 | Not Available | Positive | 106158 - 106682 | 18926.2 |
| glutamate--cysteine ligase | FHY55_RS00565 | Not Available | Positive | 106744 - 108114 | 50565.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
