Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator beti | FHY55_RS05680 | Not Available | Negative | 1115958 - 1116530 | 20767.0 |
| choline abc transporter substrate-binding protein | FHY55_RS05685 | Not Available | Positive | 1116630 - 1117550 | 32686.2 |
| choline abc transporter permease subunit | FHY55_RS05690 | Not Available | Positive | 1117663 - 1118502 | 30553.6 |
| choline abc transporter atp-binding protein | FHY55_RS05695 | Not Available | Positive | 1118499 - 1119536 | 37337.0 |
| ribose 5-phosphate isomerase b | FHY55_RS05700 | Not Available | Positive | 1119639 - 1120088 | 15559.7 |
| hypothetical protein | FHY55_RS05705 | Not Available | Negative | 1120241 - 1120534 | 10152.3 |
| glycoside hydrolase family 26 protein | FHY55_RS05710 | Not Available | Negative | 1120766 - 1121656 | 33335.0 |
| glycosyltransferase family 2 protein | FHY55_RS05715 | Not Available | Negative | 1121709 - 1123487 | 65582.0 |
| udp-glucuronic acid decarboxylase family protein | FHY55_RS05720 | Not Available | Negative | 1123525 - 1124556 | 37224.1 |
| atp-dependent nuclease | FHY55_RS05725 | Not Available | Positive | 1125430 - 1127346 | 72180.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
