Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | FHY55_RS05195 | Not Available | Negative | 1004713 - 1005729 | 35259.7 |
| uxaa family hydrolase | FHY55_RS05200 | Not Available | Negative | 1005866 - 1007359 | 52903.9 |
| phytanoyl-coa dioxygenase family protein | FHY55_RS05205 | Not Available | Negative | 1007406 - 1008347 | 34990.6 |
| mandelate racemase/muconate lactonizing enzyme family protein | FHY55_RS05210 | Not Available | Negative | 1008360 - 1009448 | 39616.3 |
| trap transporter large permease subunit | FHY55_RS05215 | Not Available | Negative | 1009526 - 1011118 | 57213.9 |
| trap transporter small permease subunit | FHY55_RS05220 | Not Available | Negative | 1011122 - 1011934 | 30257.4 |
| trap transporter substrate-binding protein | FHY55_RS05225 | Not Available | Negative | 1012060 - 1013076 | 36669.9 |
| gntr family transcriptional regulator | FHY55_RS05230 | Not Available | Positive | 1013323 - 1014033 | 26217.5 |
| fumarylacetoacetate hydrolase family protein | FHY55_RS05235 | Not Available | Positive | 1014076 - 1014921 | 29968.8 |
| lysr substrate-binding domain-containing protein | FHY55_RS05240 | Not Available | Positive | 1014932 - 1015888 | 35682.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
